Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cbx3P23198 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cbx3P23198 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cbx3P23198 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.43□□□□□ -0.58
Cbx3P23198 Gm9719-201ENSMUST00000162765 543 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.43□□□□□ -0.58
Cbx3P23198 Gm24513-201ENSMUST00000174964 138 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 Mir6990-201ENSMUST00000183724 91 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 Gm27397-201ENSMUST00000184997 107 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cbx3P23198 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cbx3P23198 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.43□□□□□ -0.58
Cbx3P23198 BC001981-202ENSMUST00000191393 1545 ntBASIC11.43□□□□□ -0.58
Cbx3P23198 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Cbx3P23198 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cbx3P23198 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.42□□□□□ -0.58
Cbx3P23198 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
Cbx3P23198 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 AW822252-206ENSMUST00000208904 237 ntBASIC11.42□□□□□ -0.58
Cbx3P23198 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.42□□□□□ -0.58
Cbx3P23198 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cbx3P23198 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cbx3P23198 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Cbx3P23198 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms