Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BdnfP21237 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 Gm27701-201ENSMUST00000184498 110 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.07□□□□□ -0.48
BdnfP21237 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.07□□□□□ -0.48
BdnfP21237 Gm38671-201ENSMUST00000200573 130 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Gm18165-201ENSMUST00000217426 928 ntBASIC12.07□□□□□ -0.48
BdnfP21237 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.07□□□□□ -0.48
BdnfP21237 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Gm6180-201ENSMUST00000065243 498 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Gm16372-201ENSMUST00000073088 450 ntBASIC12.07□□□□□ -0.48
BdnfP21237 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
BdnfP21237 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BdnfP21237 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.06□□□□□ -0.48
BdnfP21237 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
BdnfP21237 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.06□□□□□ -0.48
BdnfP21237 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.06□□□□□ -0.48
BdnfP21237 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.06□□□□□ -0.48
BdnfP21237 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.06□□□□□ -0.48
BdnfP21237 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.06□□□□□ -0.48
BdnfP21237 Gm9908-201ENSMUST00000211534 448 ntBASIC12.06□□□□□ -0.48
BdnfP21237 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.06□□□□□ -0.48
BdnfP21237 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
BdnfP21237 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.06□□□□□ -0.48
BdnfP21237 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
BdnfP21237 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
BdnfP21237 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BdnfP21237 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms