Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc8P09025 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc8P09025 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxc8P09025 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxc8P09025 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.29□□□□□ -0.28
Hoxc8P09025 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Grk6-205ENSMUST00000224653 2976 ntBASIC13.28□□□□□ -0.28
Hoxc8P09025 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Gm24891-201ENSMUST00000104391 136 ntBASIC13.28□□□□□ -0.28
Hoxc8P09025 Gm11667-201ENSMUST00000119828 486 ntBASIC13.28□□□□□ -0.28
Hoxc8P09025 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxc8P09025 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Mir7686-201ENSMUST00000200604 57 ntBASIC13.28□□□□□ -0.28
Hoxc8P09025 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.28□□□□□ -0.28
Hoxc8P09025 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc8P09025 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc8P09025 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.27□□□□□ -0.28
Hoxc8P09025 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Hoxc8P09025 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.27□□□□□ -0.28
Hoxc8P09025 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Hoxc8P09025 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc8P09025 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Hoxc8P09025 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Gm10774-201ENSMUST00000188689 204 ntBASIC13.27□□□□□ -0.29
Hoxc8P09025 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.27□□□□□ -0.29
Hoxc8P09025 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.27□□□□□ -0.29
Hoxc8P09025 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxc8P09025 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxc8P09025 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc8P09025 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxc8P09025 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc8P09025 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm23912-201ENSMUST00000104687 87 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm19459-201ENSMUST00000176240 835 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm8956-201ENSMUST00000203939 825 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm6905-201ENSMUST00000205729 511 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms