Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.89□□□□□ -0.51
ApoeP08226 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.89□□□□□ -0.51
ApoeP08226 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.89□□□□□ -0.51
ApoeP08226 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.89□□□□□ -0.51
ApoeP08226 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.89□□□□□ -0.51
ApoeP08226 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.89□□□□□ -0.51
ApoeP08226 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.89□□□□□ -0.51
ApoeP08226 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ApoeP08226 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ApoeP08226 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ApoeP08226 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.89□□□□□ -0.51
ApoeP08226 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.89□□□□□ -0.51
ApoeP08226 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ApoeP08226 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Gm23935-201ENSMUST00000102303 57 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Gm24270-201ENSMUST00000102326 57 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Gm24245-201ENSMUST00000157318 57 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Mir7684-201ENSMUST00000183858 60 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.88□□□□□ -0.51
ApoeP08226 Gm7730-201ENSMUST00000212486 454 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.88□□□□□ -0.51
ApoeP08226 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.88□□□□□ -0.51
ApoeP08226 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ApoeP08226 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
ApoeP08226 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.87□□□□□ -0.51
ApoeP08226 Gm15703-201ENSMUST00000120250 880 ntBASIC11.87□□□□□ -0.51
ApoeP08226 Gm14719-201ENSMUST00000121891 340 ntBASIC11.87□□□□□ -0.51
ApoeP08226 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
ApoeP08226 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.87□□□□□ -0.51
ApoeP08226 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.87□□□□□ -0.51
ApoeP08226 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.87□□□□□ -0.51
ApoeP08226 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.87□□□□□ -0.51
ApoeP08226 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms