Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.72□□□□□ -0.37
PdgfrbP05622 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm23931-201ENSMUST00000103842 109 ntBASIC12.72□□□□□ -0.37
PdgfrbP05622 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC12.72□□□□□ -0.37
PdgfrbP05622 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.72□□□□□ -0.37
PdgfrbP05622 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.72□□□□□ -0.37
PdgfrbP05622 AC102523.2-201ENSMUST00000227813 983 ntBASIC12.72□□□□□ -0.37
PdgfrbP05622 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PdgfrbP05622 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PdgfrbP05622 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PdgfrbP05622 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm13492-201ENSMUST00000119772 665 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm12849-201ENSMUST00000120013 739 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm15703-201ENSMUST00000120250 880 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm27514-201ENSMUST00000183692 110 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm5370-201ENSMUST00000187187 574 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm18351-201ENSMUST00000188646 883 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm22058-201ENSMUST00000083393 310 ntBASIC12.71□□□□□ -0.37
PdgfrbP05622 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.71□□□□□ -0.37
PdgfrbP05622 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
PdgfrbP05622 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
PdgfrbP05622 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
PdgfrbP05622 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.71□□□□□ -0.38
PdgfrbP05622 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
PdgfrbP05622 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.71□□□□□ -0.38
PdgfrbP05622 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
PdgfrbP05622 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PdgfrbP05622 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
PdgfrbP05622 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PdgfrbP05622 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PdgfrbP05622 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.7□□□□□ -0.38
PdgfrbP05622 Daam2-202ENSMUST00000224595 1926 ntBASIC12.7□□□□□ -0.38
PdgfrbP05622 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PdgfrbP05622 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PdgfrbP05622 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PdgfrbP05622 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms