Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col4a1P02463 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm17831-201ENSMUST00000205579 900 ntBASIC15.13■□□□□ 0.01
Col4a1P02463 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.13■□□□□ 0.01
Col4a1P02463 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.13■□□□□ 0.01
Col4a1P02463 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col4a1P02463 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col4a1P02463 Gm28388-201ENSMUST00000186262 437 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Gm38117-201ENSMUST00000194653 939 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Gm7600-201ENSMUST00000209657 785 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col4a1P02463 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col4a1P02463 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col4a1P02463 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Col4a1P02463 Gm11956-201ENSMUST00000119525 512 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Gm11246-201ENSMUST00000120880 345 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col4a1P02463 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.12■□□□□ 0.01
Col4a1P02463 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Col4a1P02463 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Gm25517-201ENSMUST00000083865 134 ntBASIC15.12■□□□□ 0.01
Col4a1P02463 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col4a1P02463 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col4a1P02463 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col4a1P02463 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Col4a1P02463 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.11■□□□□ 0.01
Col4a1P02463 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.11■□□□□ 0.01
Col4a1P02463 Gm5706-201ENSMUST00000181525 993 ntBASIC15.11■□□□□ 0.01
Col4a1P02463 Gm38210-201ENSMUST00000191944 809 ntBASIC15.11■□□□□ 0.01
Col4a1P02463 Gm44329-201ENSMUST00000197469 112 ntBASIC15.11■□□□□ 0.01
Col4a1P02463 Gm43186-201ENSMUST00000198130 824 ntBASIC15.11■□□□□ 0.01
Col4a1P02463 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.11■□□□□ 0.01
Col4a1P02463 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.11■□□□□ 0.01
Col4a1P02463 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.11■□□□□ 0.01
Col4a1P02463 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col4a1P02463 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms