Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CopeO89079 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.94□□□□□ -0.34
CopeO89079 Gm8805-201ENSMUST00000117848 313 ntBASIC12.94□□□□□ -0.34
CopeO89079 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.94□□□□□ -0.34
CopeO89079 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.94□□□□□ -0.34
CopeO89079 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.94□□□□□ -0.34
CopeO89079 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.94□□□□□ -0.34
CopeO89079 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CopeO89079 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CopeO89079 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CopeO89079 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.93□□□□□ -0.34
CopeO89079 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CopeO89079 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Gm2495-201ENSMUST00000191160 466 ntBASIC12.93□□□□□ -0.34
CopeO89079 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CopeO89079 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CopeO89079 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.93□□□□□ -0.34
CopeO89079 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.92□□□□□ -0.34
CopeO89079 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.92□□□□□ -0.34
CopeO89079 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CopeO89079 Gm13123-201ENSMUST00000122173 492 ntBASIC12.92□□□□□ -0.34
CopeO89079 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.92□□□□□ -0.34
CopeO89079 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.92□□□□□ -0.34
CopeO89079 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.92□□□□□ -0.34
CopeO89079 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.92□□□□□ -0.34
CopeO89079 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CopeO89079 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CopeO89079 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CopeO89079 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms