Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.06□□□□□ -0.48
Hcn1O88704 Gm7029-201ENSMUST00000173226 450 ntBASIC12.06□□□□□ -0.48
Hcn1O88704 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Gm6458-201ENSMUST00000211573 635 ntBASIC12.06□□□□□ -0.48
Hcn1O88704 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Hcn1O88704 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hcn1O88704 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hcn1O88704 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.06□□□□□ -0.48
Hcn1O88704 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Hcn1O88704 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.05□□□□□ -0.48
Hcn1O88704 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Hcn1O88704 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hcn1O88704 Gm16479-201ENSMUST00000121706 932 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 Gm26927-201ENSMUST00000182385 965 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.05□□□□□ -0.48
Hcn1O88704 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hcn1O88704 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Hcn1O88704 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hcn1O88704 Gm10268-201ENSMUST00000085340 555 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.05□□□□□ -0.48
Hcn1O88704 Daam2-202ENSMUST00000224595 1926 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hcn1O88704 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hcn1O88704 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.05□□□□□ -0.48
Hcn1O88704 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.05□□□□□ -0.48
Hcn1O88704 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hcn1O88704 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.04□□□□□ -0.48
Hcn1O88704 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.04□□□□□ -0.48
Hcn1O88704 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hcn1O88704 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hcn1O88704 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.04□□□□□ -0.48
Hcn1O88704 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hcn1O88704 Gm12742-201ENSMUST00000117326 410 ntBASIC12.04□□□□□ -0.48
Hcn1O88704 Gm12957-201ENSMUST00000117835 377 ntBASIC12.04□□□□□ -0.48
Hcn1O88704 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.04□□□□□ -0.48
Hcn1O88704 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.04□□□□□ -0.48
Hcn1O88704 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.04□□□□□ -0.48
Hcn1O88704 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms