Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm4726-201ENSMUST00000135604 736 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC15.99■□□□□ 0.15
Ubr1O70481 Gm6019-201ENSMUST00000148369 736 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Gm8815-201ENSMUST00000173809 620 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Gm18367-201ENSMUST00000176139 600 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Mir6958-201ENSMUST00000184207 73 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Gm2517-201ENSMUST00000215651 348 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ubr1O70481 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ubr1O70481 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ubr1O70481 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.99■□□□□ 0.15
Ubr1O70481 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.99■□□□□ 0.15
Ubr1O70481 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.99■□□□□ 0.15
Ubr1O70481 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Ubr1O70481 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ubr1O70481 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.98■□□□□ 0.15
Ubr1O70481 Gm11663-201ENSMUST00000117888 290 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm15207-201ENSMUST00000119259 442 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm16071-201ENSMUST00000119589 793 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15.98■□□□□ 0.15
Ubr1O70481 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ubr1O70481 Mir1956-201ENSMUST00000157748 65 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm24844-201ENSMUST00000158679 127 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm17826-201ENSMUST00000189720 798 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.98■□□□□ 0.15
Ubr1O70481 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ubr1O70481 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ubr1O70481 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ubr1O70481 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Gm13916-201ENSMUST00000117368 628 ntBASIC15.98■□□□□ 0.15
Ubr1O70481 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.98■□□□□ 0.15
Ubr1O70481 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.98■□□□□ 0.15
Ubr1O70481 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ubr1O70481 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Ubr1O70481 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm43447-201ENSMUST00000198471 1535 ntBASIC15.97■□□□□ 0.15
Ubr1O70481 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ubr1O70481 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.97■□□□□ 0.15
Ubr1O70481 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
Ubr1O70481 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.97■□□□□ 0.15
Ubr1O70481 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm24891-201ENSMUST00000104391 136 ntBASIC15.97■□□□□ 0.15
Ubr1O70481 Gm14665-201ENSMUST00000122294 557 ntBASIC15.97■□□□□ 0.15
Ubr1O70481 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm9630-201ENSMUST00000178304 885 ntBASIC15.97■□□□□ 0.15
Ubr1O70481 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.97■□□□□ 0.15
Ubr1O70481 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.97■□□□□ 0.15
Ubr1O70481 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.97■□□□□ 0.15
Ubr1O70481 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ubr1O70481 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms