Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.45□□□□□ -0.42
Pdlim1O70400 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pdlim1O70400 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pdlim1O70400 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm4986-201ENSMUST00000119731 549 ntBASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm11597-201ENSMUST00000121423 964 ntBASIC12.44□□□□□ -0.42
Pdlim1O70400 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm10608-202ENSMUST00000213924 676 ntBASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm8227-201ENSMUST00000223306 571 ntBASIC12.44□□□□□ -0.42
Pdlim1O70400 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pdlim1O70400 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pdlim1O70400 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pdlim1O70400 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm37201-201ENSMUST00000191845 523 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm6007-201ENSMUST00000208170 823 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm24136-201ENSMUST00000083374 165 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.43□□□□□ -0.42
Pdlim1O70400 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pdlim1O70400 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.42□□□□□ -0.42
Pdlim1O70400 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pdlim1O70400 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms