Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Limk2O54785 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Limk2O54785 Gm10434-201ENSMUST00000101158 471 ntBASIC12.76□□□□□ -0.37
Limk2O54785 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.76□□□□□ -0.37
Limk2O54785 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.76□□□□□ -0.37
Limk2O54785 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.76□□□□□ -0.37
Limk2O54785 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.76□□□□□ -0.37
Limk2O54785 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.76□□□□□ -0.37
Limk2O54785 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.76□□□□□ -0.37
Limk2O54785 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Limk2O54785 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.76□□□□□ -0.37
Limk2O54785 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.76□□□□□ -0.37
Limk2O54785 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.76□□□□□ -0.37
Limk2O54785 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Limk2O54785 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.76□□□□□ -0.37
Limk2O54785 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Limk2O54785 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.75□□□□□ -0.37
Limk2O54785 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.75□□□□□ -0.37
Limk2O54785 Rmrp-201ENSMUST00000157463 271 ntBASIC12.75□□□□□ -0.37
Limk2O54785 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Limk2O54785 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.75□□□□□ -0.37
Limk2O54785 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.75□□□□□ -0.37
Limk2O54785 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.75□□□□□ -0.37
Limk2O54785 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.75□□□□□ -0.37
Limk2O54785 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Limk2O54785 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Limk2O54785 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Limk2O54785 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Limk2O54785 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Limk2O54785 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.74□□□□□ -0.37
Limk2O54785 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Limk2O54785 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Gm24231-201ENSMUST00000104315 133 ntBASIC12.74□□□□□ -0.37
Limk2O54785 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Limk2O54785 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.74□□□□□ -0.37
Limk2O54785 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.74□□□□□ -0.37
Limk2O54785 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms