Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.93□□□□□ -0.82
Efnb3O35393 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.93□□□□□ -0.82
Efnb3O35393 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Efnb3O35393 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Gm14350-201ENSMUST00000116642 640 ntBASIC9.93□□□□□ -0.82
Efnb3O35393 Gm15371-201ENSMUST00000117057 784 ntBASIC9.93□□□□□ -0.82
Efnb3O35393 Gm12859-201ENSMUST00000117834 427 ntBASIC9.93□□□□□ -0.82
Efnb3O35393 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.93□□□□□ -0.82
Efnb3O35393 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.93□□□□□ -0.82
Efnb3O35393 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.93□□□□□ -0.82
Efnb3O35393 Gm8227-201ENSMUST00000223306 571 ntBASIC9.93□□□□□ -0.82
Efnb3O35393 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Efnb3O35393 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Efnb3O35393 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Efnb3O35393 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Efnb3O35393 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Efnb3O35393 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Efnb3O35393 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Efnb3O35393 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Efnb3O35393 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.92□□□□□ -0.82
Efnb3O35393 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.92□□□□□ -0.82
Efnb3O35393 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.92□□□□□ -0.82
Efnb3O35393 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.92□□□□□ -0.82
Efnb3O35393 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Gm37917-201ENSMUST00000194711 392 ntBASIC9.92□□□□□ -0.82
Efnb3O35393 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Gm44069-201ENSMUST00000204898 506 ntBASIC9.92□□□□□ -0.82
Efnb3O35393 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Gm15823-201ENSMUST00000064305 670 ntBASIC9.92□□□□□ -0.82
Efnb3O35393 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.92□□□□□ -0.82
Efnb3O35393 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Efnb3O35393 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Efnb3O35393 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Gm13689-201ENSMUST00000119360 685 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC9.91□□□□□ -0.82
Efnb3O35393 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms