Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ube3aO08759 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ube3aO08759 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ube3aO08759 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ube3aO08759 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.57□□□□□ -0.24
Ube3aO08759 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ube3aO08759 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ube3aO08759 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.57□□□□□ -0.24
Ube3aO08759 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.57□□□□□ -0.24
Ube3aO08759 Gm9908-201ENSMUST00000211534 448 ntBASIC13.57□□□□□ -0.24
Ube3aO08759 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ube3aO08759 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ube3aO08759 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3aO08759 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.57□□□□□ -0.24
Ube3aO08759 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.56□□□□□ -0.24
Ube3aO08759 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ube3aO08759 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ube3aO08759 Mir6392-201ENSMUST00000184924 108 ntBASIC13.56□□□□□ -0.24
Ube3aO08759 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.56□□□□□ -0.24
Ube3aO08759 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Gm18473-201ENSMUST00000220543 868 ntBASIC13.56□□□□□ -0.24
Ube3aO08759 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ube3aO08759 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3aO08759 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ube3aO08759 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Ube3aO08759 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Ube3aO08759 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ube3aO08759 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ube3aO08759 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Ube3aO08759 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Ube3aO08759 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.55□□□□□ -0.24
Ube3aO08759 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ube3aO08759 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.55□□□□□ -0.24
Ube3aO08759 Gm14760-201ENSMUST00000121831 999 ntBASIC13.55□□□□□ -0.24
Ube3aO08759 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube3aO08759 Gm15429-201ENSMUST00000151268 798 ntBASIC13.55□□□□□ -0.24
Ube3aO08759 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube3aO08759 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.55□□□□□ -0.24
Ube3aO08759 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.55□□□□□ -0.24
Ube3aO08759 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ube3aO08759 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3aO08759 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.55□□□□□ -0.24
Ube3aO08759 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms