Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa8J3QNX5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.45□□□□□ -0.58
Shisa8J3QNX5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.45□□□□□ -0.58
Shisa8J3QNX5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm27390-201ENSMUST00000184516 176 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm28693-202ENSMUST00000190758 331 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shisa8J3QNX5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Gm7063-201ENSMUST00000186840 981 ntBASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Gm6983-201ENSMUST00000214912 628 ntBASIC11.43□□□□□ -0.58
Shisa8J3QNX5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.43□□□□□ -0.58
Shisa8J3QNX5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa8J3QNX5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms