Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Gm15573-201ENSMUST00000119487 540 ntBASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Mir6958-201ENSMUST00000184207 73 ntBASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Gm5714-201ENSMUST00000197343 566 ntBASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 AC122408.1-201ENSMUST00000218949 218 ntBASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc180J3QNE4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Gm14665-201ENSMUST00000122294 557 ntBASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 CT009713.8-202ENSMUST00000224732 385 ntBASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc180J3QNE4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm11892-201ENSMUST00000117711 1202 ntBASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm13888-201ENSMUST00000119148 422 ntBASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm38210-201ENSMUST00000191944 809 ntBASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm38117-201ENSMUST00000194653 939 ntBASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc180J3QNE4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 AC159103.1-201ENSMUST00000228325 429 ntBASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
Ccdc180J3QNE4 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms