Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Gm44872-201ENSMUST00000207864 420 ntBASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Gm45612-201ENSMUST00000211320 160 ntBASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim55G3X8Y1 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.88□□□□□ -0.35
Trim55G3X8Y1 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Gm27390-201ENSMUST00000184516 176 ntBASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim55G3X8Y1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms