Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Gm28038F7BCN9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
Gm28038F7BCN9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm28038F7BCN9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Gm28038F7BCN9 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.46□□□□□ -0.9
Gm28038F7BCN9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Gm28038F7BCN9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm13453-201ENSMUST00000118708 357 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm23617-201ENSMUST00000175410 95 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Mir6956-201ENSMUST00000183598 62 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm43703-201ENSMUST00000200523 763 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 AC154730.1-201ENSMUST00000227874 816 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm28038F7BCN9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm22588-201ENSMUST00000157510 140 ntBASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm28038F7BCN9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms