Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb9E9Q5G2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm24830-201ENSMUST00000102024 166 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm25890-201ENSMUST00000177643 165 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm22614-201ENSMUST00000178300 165 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 AA914427-201ENSMUST00000193194 1166 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm22042-201ENSMUST00000082989 165 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm26232-201ENSMUST00000083360 166 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm26110-201ENSMUST00000083971 165 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.74□□□□□ -0.05
Pcdhb9E9Q5G2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm9630-201ENSMUST00000178304 885 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm44967-201ENSMUST00000207047 631 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm10312-201ENSMUST00000078515 489 ntBASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb9E9Q5G2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms