Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm5537-201ENSMUST00000091117 1252 ntBASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm8325-201ENSMUST00000099086 453 ntBASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hfm1D3Z4R1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Gm12969-201ENSMUST00000120199 1004 ntBASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Gm12407-201ENSMUST00000180219 324 ntBASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Gm17889-201ENSMUST00000198410 598 ntBASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Gm18227-201ENSMUST00000211082 1468 ntBASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hfm1D3Z4R1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Hfm1D3Z4R1 Gm11660-201ENSMUST00000120955 412 ntBASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hfm1D3Z4R1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm15207-201ENSMUST00000119259 442 ntBASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm8531-201ENSMUST00000188319 893 ntBASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 AC112945.1-201ENSMUST00000226413 514 ntBASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hfm1D3Z4R1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms