Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.27□□□□□ -0.61
Shank1D3YZU1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm27627-201ENSMUST00000183644 150 ntBASIC11.26□□□□□ -0.61
Shank1D3YZU1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm17827-201ENSMUST00000211825 742 ntBASIC11.26□□□□□ -0.61
Shank1D3YZU1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.26□□□□□ -0.61
Shank1D3YZU1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.26□□□□□ -0.61
Shank1D3YZU1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm18893-201ENSMUST00000198416 943 ntBASIC11.26□□□□□ -0.61
Shank1D3YZU1 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.26□□□□□ -0.61
Shank1D3YZU1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.25□□□□□ -0.61
Shank1D3YZU1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.25□□□□□ -0.61
Shank1D3YZU1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Gm13035-201ENSMUST00000117496 342 ntBASIC11.25□□□□□ -0.61
Shank1D3YZU1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 AY036118-201ENSMUST00000200021 923 ntBASIC11.25□□□□□ -0.61
Shank1D3YZU1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.25□□□□□ -0.61
Shank1D3YZU1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Shank1D3YZU1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Shank1D3YZU1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Shank1D3YZU1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm11941-201ENSMUST00000119904 610 ntBASIC11.24□□□□□ -0.61
Shank1D3YZU1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm16296-201ENSMUST00000159905 325 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms