Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm8652-201ENSMUST00000181363 964 ntBASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm17794-201ENSMUST00000220252 955 ntBASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm19163-201ENSMUST00000223313 780 ntBASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc112A0AUP1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc112A0AUP1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Gm11814-201ENSMUST00000119515 929 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Gm12363-201ENSMUST00000122250 668 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Gm38092-201ENSMUST00000195600 653 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Gm6745-201ENSMUST00000199216 526 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Gm5356-201ENSMUST00000093326 615 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc112A0AUP1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Gm22331-201ENSMUST00000158066 136 ntBASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Gm27892-201ENSMUST00000185017 106 ntBASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Gm8227-201ENSMUST00000223306 571 ntBASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms