Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm13365-201ENSMUST00000121188 973 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Mir1895-201ENSMUST00000122615 79 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Mir6990-201ENSMUST00000183724 91 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm27533-201ENSMUST00000183800 152 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm17795-201ENSMUST00000214505 757 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav7n-4A0A075B620 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm8410-201ENSMUST00000117225 605 ntBASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm24158-201ENSMUST00000175263 71 ntBASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav7n-4A0A075B620 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav7n-4A0A075B620 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Trav7n-4A0A075B620 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Trav7n-4A0A075B620 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.46□□□□□ -0.9
Trav7n-4A0A075B620 Gm22065-201ENSMUST00000103753 110 ntBASIC9.46□□□□□ -0.9
Trav7n-4A0A075B620 Gm22066-201ENSMUST00000103761 110 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms