Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
H2afb2S4R1M3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Rmrp-201ENSMUST00000157463 271 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Gm45784-201ENSMUST00000188360 142 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Gm18187-201ENSMUST00000196476 984 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Gm5904-201ENSMUST00000210286 865 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
H2afb2S4R1M3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm13226-201ENSMUST00000117838 404 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm14660-201ENSMUST00000119809 575 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm6222-202ENSMUST00000182143 629 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb2S4R1M3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms