Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.34□□□□□ -0.59
H2afb3S4R1G7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
H2afb3S4R1G7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
H2afb3S4R1G7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm11918-201ENSMUST00000121660 179 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm2231-201ENSMUST00000125661 612 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm26185-201ENSMUST00000157692 266 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm8099-201ENSMUST00000200510 742 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms