Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cldn13Q9Z0S4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm12291-201ENSMUST00000121627 311 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Mir1938-201ENSMUST00000158746 100 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm17208-201ENSMUST00000168388 535 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm6222-202ENSMUST00000182143 629 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm4768-201ENSMUST00000206199 686 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Matn2-203ENSMUST00000226766 3252 ntBASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cldn13Q9Z0S4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Gm18054-201ENSMUST00000207539 555 ntBASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Gm45880-201ENSMUST00000213041 853 ntBASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cldn13Q9Z0S4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms