Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Gm13996-201ENSMUST00000118456 430 ntBASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Gm5070-201ENSMUST00000177599 862 ntBASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcb1Q9Z0H3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm2260-201ENSMUST00000184965 657 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Grk6-205ENSMUST00000224653 2976 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcb1Q9Z0H3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gm45598-202ENSMUST00000210719 986 ntBASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smarcb1Q9Z0H3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms