Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.75□□□□□ -0.37
Tubd1Q9R1K7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Mir8109-201ENSMUST00000184375 117 ntBASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubd1Q9R1K7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm24934-201ENSMUST00000103764 111 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.73□□□□□ -0.37
Tubd1Q9R1K7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tubd1Q9R1K7 Gm24830-201ENSMUST00000102024 166 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms