Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.27□□□□□ -0.44
Col4a4Q9QZR9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm12663-201ENSMUST00000118481 958 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm15615-201ENSMUST00000118876 198 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm9089-201ENSMUST00000122027 526 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm26368-201ENSMUST00000157826 118 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm18801-201ENSMUST00000186616 536 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm43852-201ENSMUST00000202098 917 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col4a4Q9QZR9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm9166-201ENSMUST00000120293 561 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm30671-201ENSMUST00000214898 318 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm11244-201ENSMUST00000121243 237 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Mir6941-201ENSMUST00000184711 59 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Gm6108-201ENSMUST00000208365 367 ntBASIC12.26□□□□□ -0.45
Col4a4Q9QZR9 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms