Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Rprl2-201ENSMUST00000157150 290 ntBASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Dupd1-202ENSMUST00000224735 548 ntBASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trem1Q9JKE2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gm15678-201ENSMUST00000117573 960 ntBASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gm29541-201ENSMUST00000191351 678 ntBASIC11.23□□□□□ -0.61
Trem1Q9JKE2 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.23□□□□□ -0.61
Trem1Q9JKE2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.23□□□□□ -0.61
Trem1Q9JKE2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms