Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm2383-201ENSMUST00000181461 807 ntBASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atp13a1Q9EPE9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gm9022-201ENSMUST00000182482 992 ntBASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gm18304-201ENSMUST00000189162 546 ntBASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atp13a1Q9EPE9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Atp13a1Q9EPE9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms