Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Gm29608-201ENSMUST00000190444 463 ntBASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ssr3Q9DCF9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm10253-201ENSMUST00000194270 940 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm43474-201ENSMUST00000196415 774 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm42599-201ENSMUST00000201308 469 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ssr3Q9DCF9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ssr3Q9DCF9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms