Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
U2af1Q9D883 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
U2af1Q9D883 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.52■□□□□ 0.24
U2af1Q9D883 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
U2af1Q9D883 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
U2af1Q9D883 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Gm15547-201ENSMUST00000122152 333 ntBASIC16.52■□□□□ 0.24
U2af1Q9D883 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.52■□□□□ 0.24
U2af1Q9D883 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.52■□□□□ 0.24
U2af1Q9D883 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.52■□□□□ 0.24
U2af1Q9D883 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.52■□□□□ 0.24
U2af1Q9D883 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.52■□□□□ 0.24
U2af1Q9D883 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Gm26035-201ENSMUST00000083065 308 ntBASIC16.52■□□□□ 0.24
U2af1Q9D883 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
U2af1Q9D883 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.52■□□□□ 0.23
U2af1Q9D883 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
U2af1Q9D883 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Gm14760-201ENSMUST00000121831 999 ntBASIC16.51■□□□□ 0.23
U2af1Q9D883 Gm24845-201ENSMUST00000158034 109 ntBASIC16.51■□□□□ 0.23
U2af1Q9D883 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
U2af1Q9D883 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
U2af1Q9D883 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
U2af1Q9D883 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
U2af1Q9D883 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.5■□□□□ 0.23
U2af1Q9D883 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.5■□□□□ 0.23
U2af1Q9D883 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Gm18304-201ENSMUST00000189162 546 ntBASIC16.5■□□□□ 0.23
U2af1Q9D883 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.5■□□□□ 0.23
U2af1Q9D883 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
U2af1Q9D883 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
U2af1Q9D883 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
U2af1Q9D883 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm11930-201ENSMUST00000117788 190 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm14832-201ENSMUST00000121289 322 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm28882-201ENSMUST00000185504 314 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.49■□□□□ 0.23
U2af1Q9D883 Gm4857-201ENSMUST00000192718 785 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms