Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cldnd1Q9CQX5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cldnd1Q9CQX5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cldnd1Q9CQX5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cldnd1Q9CQX5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm15703-201ENSMUST00000120250 880 ntBASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm11246-201ENSMUST00000120880 345 ntBASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cldnd1Q9CQX5 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm25880-201ENSMUST00000104331 132 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm13809-201ENSMUST00000117921 597 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm4726-201ENSMUST00000135604 736 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm6019-201ENSMUST00000148369 736 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm2517-201ENSMUST00000215651 348 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cldnd1Q9CQX5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm8199-201ENSMUST00000121323 823 ntBASIC12.81□□□□□ -0.36
Cldnd1Q9CQX5 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms