Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm23984-201ENSMUST00000157139 203 ntBASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm9794-201ENSMUST00000202370 423 ntBASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Gm7653-201ENSMUST00000214567 508 ntBASIC12.34□□□□□ -0.43
Trim8Q99PJ2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim8Q99PJ2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim8Q99PJ2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim8Q99PJ2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim8Q99PJ2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Trim8Q99PJ2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim8Q99PJ2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim8Q99PJ2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm6152-201ENSMUST00000151704 340 ntBASIC12.33□□□□□ -0.44
Trim8Q99PJ2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm37917-201ENSMUST00000194711 392 ntBASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm6745-201ENSMUST00000199216 526 ntBASIC12.33□□□□□ -0.44
Trim8Q99PJ2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim8Q99PJ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trim8Q99PJ2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms