Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gm23912-201ENSMUST00000104687 87 ntBASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm11244-201ENSMUST00000121243 237 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm7504-201ENSMUST00000201449 424 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm6390-201ENSMUST00000215034 589 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh15Q99PJ1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm22146-201ENSMUST00000157397 288 ntBASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm5700-201ENSMUST00000191483 989 ntBASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms