Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Gm44958-201ENSMUST00000203734 736 ntBASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Cdh23Q99PF4 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm11619-201ENSMUST00000117474 237 ntBASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm11942-201ENSMUST00000180255 345 ntBASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm23680-201ENSMUST00000083162 164 ntBASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdh23Q99PF4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm11560-201ENSMUST00000117567 948 ntBASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.44□□□□□ -0.42
Cdh23Q99PF4 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm9797-202ENSMUST00000218003 294 ntBASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm43969-201ENSMUST00000204833 535 ntBASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdh23Q99PF4 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm12419-201ENSMUST00000116649 636 ntBASIC12.43□□□□□ -0.42
Cdh23Q99PF4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdh23Q99PF4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms