Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm13570-201ENSMUST00000140763 309 ntBASIC13.38□□□□□ -0.27
Sf3b1Q99NB9 Gm26361-201ENSMUST00000158868 186 ntBASIC13.38□□□□□ -0.27
Sf3b1Q99NB9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b1Q99NB9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b1Q99NB9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sf3b1Q99NB9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b1Q99NB9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Mir5132-201ENSMUST00000175166 71 ntBASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm16505-201ENSMUST00000179981 232 ntBASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Gm10312-201ENSMUST00000078515 489 ntBASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b1Q99NB9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Gm11439-201ENSMUST00000118598 409 ntBASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sf3b1Q99NB9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Gm14277-201ENSMUST00000121195 360 ntBASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sf3b1Q99NB9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms