Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp1b1Q99LU0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Gm24196-201ENSMUST00000179161 110 ntBASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Gm29705-201ENSMUST00000212598 474 ntBASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Gm6091-201ENSMUST00000098307 165 ntBASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp1b1Q99LU0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Mir686-201ENSMUST00000102174 109 ntBASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm16479-201ENSMUST00000121706 932 ntBASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm2231-201ENSMUST00000125661 612 ntBASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms