Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm11675-201ENSMUST00000121873 832 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm7666-201ENSMUST00000146631 819 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm4157-201ENSMUST00000211647 679 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm10288-201ENSMUST00000084614 537 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RtcbQ99LF4 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.47■□□□□ 0.07
RtcbQ99LF4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm24231-201ENSMUST00000104315 133 ntBASIC15.46■□□□□ 0.07
RtcbQ99LF4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm13809-201ENSMUST00000117921 597 ntBASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm27530-201ENSMUST00000184096 98 ntBASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm2965-201ENSMUST00000198365 343 ntBASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.46■□□□□ 0.07
RtcbQ99LF4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RtcbQ99LF4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RtcbQ99LF4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RtcbQ99LF4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.46■□□□□ 0.06
RtcbQ99LF4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.06
RtcbQ99LF4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm12857-201ENSMUST00000117678 592 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm8199-201ENSMUST00000121323 823 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm23119-201ENSMUST00000158610 140 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.45■□□□□ 0.06
RtcbQ99LF4 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RtcbQ99LF4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms