Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Rprl1-201ENSMUST00000158050 327 ntBASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sf3b3Q921M3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm5733-201ENSMUST00000190232 939 ntBASIC15.06■□□□□ 0
Sf3b3Q921M3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Gm5847-201ENSMUST00000178959 1595 ntBASIC15.06■□□□□ 0
Sf3b3Q921M3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sf3b3Q921M3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sf3b3Q921M3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3b3Q921M3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sf3b3Q921M3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sf3b3Q921M3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3b3Q921M3 Matn2-206ENSMUST00000228570 2798 ntBASIC15.05■□□□□ 0
Sf3b3Q921M3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sf3b3Q921M3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Gm12501-201ENSMUST00000119163 529 ntBASIC15.05■□□□□ -0
Sf3b3Q921M3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sf3b3Q921M3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Gm5051-201ENSMUST00000204085 485 ntBASIC15.05■□□□□ -0
Sf3b3Q921M3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sf3b3Q921M3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.05■□□□□ -0
Sf3b3Q921M3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Sf3b3Q921M3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.04■□□□□ -0
Sf3b3Q921M3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sf3b3Q921M3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Sf3b3Q921M3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sf3b3Q921M3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm8343-201ENSMUST00000182705 994 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm3332-201ENSMUST00000189337 928 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm4607-201ENSMUST00000206649 577 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm26448-201ENSMUST00000082446 203 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sf3b3Q921M3 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sf3b3Q921M3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.04■□□□□ -0
Sf3b3Q921M3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms