Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb5Q91XZ5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Gm23949-201ENSMUST00000104027 127 ntBASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 AU022133-201ENSMUST00000200601 873 ntBASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Gm8959-201ENSMUST00000213150 571 ntBASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Matn2-206ENSMUST00000228570 2798 ntBASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb5Q91XZ5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm15711-201ENSMUST00000118889 535 ntBASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm12380-201ENSMUST00000119012 544 ntBASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm28071-201ENSMUST00000190355 478 ntBASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Pcdhb5Q91XZ5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb5Q91XZ5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Pcdhb5Q91XZ5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb5Q91XZ5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb5Q91XZ5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb5Q91XZ5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms