Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm38002-201ENSMUST00000193255 180 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm19309-201ENSMUST00000218295 205 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm18584-201ENSMUST00000203098 964 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm45880-201ENSMUST00000213041 853 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Gm5781-201ENSMUST00000219792 443 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga4Q91XY4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms