Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm24934-201ENSMUST00000103764 111 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm23949-201ENSMUST00000104027 127 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm14263-201ENSMUST00000117955 746 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm15711-201ENSMUST00000118889 535 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Gm23119-201ENSMUST00000158610 140 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.38□□□□□ -0.11
Trex1Q91XB0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trex1Q91XB0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gm11989-201ENSMUST00000117240 672 ntBASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gm11362-201ENSMUST00000118838 850 ntBASIC14.37□□□□□ -0.11
Trex1Q91XB0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gm44958-201ENSMUST00000203734 736 ntBASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gm44100-201ENSMUST00000204329 436 ntBASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gm8959-201ENSMUST00000213150 571 ntBASIC14.37□□□□□ -0.11
Trex1Q91XB0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.37□□□□□ -0.11
Trex1Q91XB0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex1Q91XB0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.36□□□□□ -0.11
Trex1Q91XB0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.36□□□□□ -0.11
Trex1Q91XB0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm18734-201ENSMUST00000172937 808 ntBASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm7848-201ENSMUST00000210739 718 ntBASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Trex1Q91XB0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.35□□□□□ -0.11
Trex1Q91XB0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.35□□□□□ -0.11
Trex1Q91XB0 Gm22334-201ENSMUST00000158070 133 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms