Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm2260-201ENSMUST00000184965 657 ntBASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm32999-201ENSMUST00000192693 562 ntBASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.46□□□□□ -0.25
TraipQ8VIG6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
TraipQ8VIG6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TraipQ8VIG6 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
TraipQ8VIG6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TraipQ8VIG6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TraipQ8VIG6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TraipQ8VIG6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
TraipQ8VIG6 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TraipQ8VIG6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm13296-201ENSMUST00000117854 997 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm11439-201ENSMUST00000118598 409 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm24990-201ENSMUST00000157406 323 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm23119-201ENSMUST00000158610 140 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TraipQ8VIG6 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm5070-201ENSMUST00000177599 862 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm16505-201ENSMUST00000179981 232 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 AC153936.1-201ENSMUST00000219874 395 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TraipQ8VIG6 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.44□□□□□ -0.26
TraipQ8VIG6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms