Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm38223-201ENSMUST00000194484 695 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm6218-201ENSMUST00000219812 628 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh18Q8VHR0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh18Q8VHR0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh18Q8VHR0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms