Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf8Q8VC56 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf8Q8VC56 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Gm13829-201ENSMUST00000119600 138 ntBASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Gm29649-201ENSMUST00000185649 419 ntBASIC12.18□□□□□ -0.46
Rnf8Q8VC56 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf8Q8VC56 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf8Q8VC56 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf8Q8VC56 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms