Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup85Q8R480 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup85Q8R480 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm11793-201ENSMUST00000120433 981 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm23363-201ENSMUST00000175024 79 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm27501-201ENSMUST00000183599 107 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm38266-201ENSMUST00000194931 421 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Gm8099-201ENSMUST00000200510 742 ntBASIC12.96□□□□□ -0.33
Nup85Q8R480 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup85Q8R480 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup85Q8R480 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup85Q8R480 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.96□□□□□ -0.34
Nup85Q8R480 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nup85Q8R480 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nup85Q8R480 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.96□□□□□ -0.34
Nup85Q8R480 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nup85Q8R480 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm14723-201ENSMUST00000118686 215 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm12363-201ENSMUST00000122250 668 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.95□□□□□ -0.34
Nup85Q8R480 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Nup85Q8R480 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup85Q8R480 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm3961-201ENSMUST00000204425 994 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.95□□□□□ -0.34
Nup85Q8R480 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Nup85Q8R480 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup85Q8R480 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms