Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm26464-201ENSMUST00000157094 305 ntBASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.45□□□□□ -0.58
Ebf4Q8K4J2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ebf4Q8K4J2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ebf4Q8K4J2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms