Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm7809-201ENSMUST00000153199 742 ntBASIC11.88□□□□□ -0.51
Clrn1Q8K445 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm16296-201ENSMUST00000159905 325 ntBASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm8738-201ENSMUST00000172606 329 ntBASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gm38092-201ENSMUST00000195600 653 ntBASIC11.88□□□□□ -0.51
Clrn1Q8K445 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.88□□□□□ -0.51
Clrn1Q8K445 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Clrn1Q8K445 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.87□□□□□ -0.51
Clrn1Q8K445 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm25261-201ENSMUST00000157416 134 ntBASIC11.87□□□□□ -0.51
Clrn1Q8K445 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm37008-201ENSMUST00000195712 319 ntBASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.87□□□□□ -0.51
Clrn1Q8K445 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Clrn1Q8K445 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.86□□□□□ -0.51
Clrn1Q8K445 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.86□□□□□ -0.51
Clrn1Q8K445 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.86□□□□□ -0.51
Clrn1Q8K445 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Gm3890-201ENSMUST00000182416 207 ntBASIC11.86□□□□□ -0.51
Clrn1Q8K445 Gm27514-201ENSMUST00000183692 110 ntBASIC11.86□□□□□ -0.51
Clrn1Q8K445 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.86□□□□□ -0.51
Clrn1Q8K445 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.86□□□□□ -0.51
Clrn1Q8K445 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Clrn1Q8K445 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms