Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.19□□□□□ -0.14
Syne4Q8CII8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Gm5455-201ENSMUST00000058710 715 ntBASIC14.19□□□□□ -0.14
Syne4Q8CII8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Syne4Q8CII8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.18□□□□□ -0.14
Syne4Q8CII8 Gm15881-201ENSMUST00000148792 942 ntBASIC14.18□□□□□ -0.14
Syne4Q8CII8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Gm3332-201ENSMUST00000189337 928 ntBASIC14.18□□□□□ -0.14
Syne4Q8CII8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Gm19287-201ENSMUST00000203190 358 ntBASIC14.18□□□□□ -0.14
Syne4Q8CII8 Gm45550-201ENSMUST00000209380 946 ntBASIC14.18□□□□□ -0.14
Syne4Q8CII8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.18□□□□□ -0.14
Syne4Q8CII8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Syne4Q8CII8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Mir6958-201ENSMUST00000184207 73 ntBASIC14.17□□□□□ -0.14
Syne4Q8CII8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Gm43184-201ENSMUST00000197247 542 ntBASIC14.17□□□□□ -0.14
Syne4Q8CII8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Gm44958-201ENSMUST00000203734 736 ntBASIC14.17□□□□□ -0.14
Syne4Q8CII8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Syne4Q8CII8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Syne4Q8CII8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms